miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|78013702|gb|DV482090.1|DV482090 CCACGCGTCCGGTCTATGAGGCGATGAGTGATGATGGGTTTTTCTTTGCTGTCAAGGAGGTGTCATTAATTGACCAAGGA
ATCAATGCAAAACAGCGCATCATACAGCTTGAGCATGAGGTATCCCTCTTGAGTCGTTTGGAGCATGACAATATAGTTCA
GTACTATGGAACAGACAAGGAAGATGGAAAATTGTATATTTTTCTTGAACTTGTGAGTCAAGGCTCTTTGGCGGCTTTAT
ATCAAAGATACTGTTTACAAGATTCACAAGTCTCAGCATATACAAGACAGATTTTGAATGGTTTGAACTATCTACATCAG
CGGAATGTGCTGCACAGGTGAGTTCTAGAATGCCTATCAAATTGATAATCTAACCTACTTTTGTTTCTTTTTTCTTCCAT
TGTTAGGTACTTCCTCCGTTCCTAAATACTTGTCGCTATTTTAGTGCAAACTTGTACTAAAACAGCGACAAGTATTTAGG
AACGGAGGGAGTATTTACTTATCTATATTATATTTCTTGCTGGCTATTGAGAGCCTATTCATTTGCTTCGTTACACAGAG
ATATCAAATGTGCAAATATCCTAGTTGATGCAAATGGGTCGGTCAAATTAGCTGATTTTGGGCTTGCGAAGGAGATGTCA
ATTTTGAGCCAGGCAAGATCTAGCAAGGGAACTGTGTTCTGGATGGCCCCTG




Most similar to sp|Q39008|M3K1_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q39008|M3K1_ARATH Mitogen-activated protein kinase kinase kinase
           1 OS=Arabidopsis thaliana GN=MEKK1 PE=1 SV=2
          Length = 608

 Score =  140 bits (352), Expect = 1e-32
 Identities = 71/109 (65%), Positives = 85/109 (77%)
 Frame = +3

Query: 12  VYEAMSDDGFFFAVKEVSLIDQGINAKQRIIQLEHEVSLLSRLEHDNIVQYYGTDKEDGK 191
           VYE +S DG FFAVKEVSL+DQG  A++ I QLE E+ LLS+L+H NIV+Y GT K+   
Sbjct: 347 VYEGISGDGDFFAVKEVSLLDQGSQAQECIQQLEGEIKLLSQLQHQNIVRYRGTAKDGSN 406

Query: 192 LYIFLELVSQGSLAALYQRYCLQDSQVSAYTRQILNGLNYLHQRNVLHR 338
           LYIFLELV+QGSL  LYQRY L+DS VS YTRQIL+GL YLH +  +HR
Sbjct: 407 LYIFLELVTQGSLLKLYQRYQLRDSVVSLYTRQILDGLKYLHDKGFIHR 455